MNC5703176

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
Contig16157 MN5157578 GQ0011.BR_I03 GQ0011_I03 GQ0011.B3.r_I03 GQ03804_J07 GQ03804_J07

BLAST

Blastx Description Blastx Hit Id Blastx e-value
Dbj|BAA78736.1 UniRef100_Q9FH99 1.08316e-40

Unigene

Unigene Id: 22068
Unigene Sequence: GTGATTTTGTTTGGGGCATGGAGGACCAGGTTGAGGTATCTGCAATTGAGGTGCTTCCTGTGGATGCTCTTGCTCATTGC
TTCCTCTCATTATCGTCATTCAAGGACTTGGCTCAGGTAAGCATTGTATGCAGGAAATGGAGGGAAGCCGTGAAACAGTC
TCTGGCTCGGAGAGATAAGCTGAGCTTTGCAGGATGGAAAATGGATGACAATTCTCTGGCAAGACTCGTTCAAGGGGCTT
TCGGCCTCAAAGAACTTGACATTTCCCGGGGCTGCTGGGGTTGTCGAATAACAGATGATGGCCTGTACAAGATTTCTTTA
GCCAAGTGCTGTATCAATCTTACTTCAGTCTCCATGTGGGGCATAACAGGAATTACTGACAATGGTGTTATCCAGCTGGT
TTCTAGGGCCAGGTCTTTACAGCATCTGAACATTGGTGGTACCTTCATTACTGATGATTCTTTGTTCATAATTGCAAGTC
ATTGCCCTCAGTTGAAGGTGCTTATTCTTTGNGGTTGTCGCCATGTTACTGAGAGGGGCCTCTTCGCACTTAT
Full Translation: DFVWGMEDQVEVSAIEVLPVDALAHCFLSLSSFKDLAQVSIVCRKWREAVKQSLARRDKLSFAGWKMDDNSLARLVQGAF
GLKELDISRGCWGCRITDDGLYKISLAKCCINLTSVSMWGITGITDNGVIQLVSRARSLQHLNIGGTFITDDSLFIIASH
CPQLKVLILXGCRHVTERGLFAL
Longest Translation Frame: +3
Longest ORF: DFVWGMEDQVEVSAIEVLPVDALAHCFLSLSSFKDLAQVSIVCRKWREAVKQSLARRDKLSFAGWKMDDNSLARLVQGAF
GLKELDISRGCWGCRITDDGLYKISLAKCCINLTSVSMWGITGITDNGVIQLVSRARSLQHLNIGGTFITDDSLFIIASH
CPQLKVLILXGCRHVTERGLFAL
Max ORF Length: 183

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
GO:0016740 transferase activity GO:0005515 protein binding GO:0004842 ubiquitin-protein ligase activity GO:0008233 peptidase activity GO:0010105 negative regulation of ethylene mediated signaling pathway GO:0006512 ubiquitin cycle GO:0006464 protein modification GO:0006508 proteolysis GO:0006511 ubiquitin-dependent protein catabolic process GO:0005634 nucleus GO:0005737 cytoplasm GO:0000151 ubiquitin ligase complex

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
weakly similar to UP|Q5VRR5 (Q5VRR5) F-box family protein-like, partial (85%) TC57402 0

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
weakly similar to UP|Q5VRR5_ORYSA (Q5VRR5) F-box family protein-like, partial (85%) /QuerySize=1006 TC17835 0

Pfam

Description Hit Id e-value
Nodulin-like PF06813 8.40e-17

SMART

Description Hit Id e-value
LRR_CC_2 SM00367 7.50e-26