MNC5697458
EST
| ForestTreeDB Contig(dir8): | MN ESTs: | GQ Reads: | GQ Clones: | GCAT 2.0 Clusters: | GCAT 3.0 Clusters: | GCAT 3.1 Clusters: |
|---|---|---|---|---|---|---|
| Contig10439 | MN5157529,MN5238549 | GQ0011.TB_E01,GQ0206.B3_G11 | GQ0011_E01,GQ0206_G11 | GQ0011.B3.r_E01 | GQ03313_M08 | GQ03313_M08 |
BLAST
| Blastx Description | Blastx Hit Id | Blastx e-value |
|---|---|---|
| Putative Myb-related protein | UniRef100_Q9AUT3 | 1.44376e-37 |
Unigene
| Unigene Id: | 16350 |
|---|---|
| Unigene Sequence: | TGGACAGATCCTCTGGTAACTTTCATTAATAATGTTATGACCCAAAAAAAAGTTCAGCTTCTTTGTCTTTCTGTAGAAAG AAAACAATTGCAGCCTACAGTAAAGGGCATGAATCCCAGTCTTACATGCATCGTGTTTATTTTTTTTCGAAATCAAGAAG AATACCCAAGAACCCCATTAATCAAAAGGACTTCCCCTTCTTCTTATATCGGGCAACATCCTCTTCGTTGGGAAATAGCC CCATGAGTCGGCCTGCAGAATTCTGATAAGCAAACATAAACCCCCCCATCAGACCAATAATCCCTGCTGTCACCATGGAC GGTCCCCTTAAGCTGCAGTTACCACCTGCGAGGAAAGAATGGTTATTAAACGTTTTTCCCCTCATGTCCTCAAGTGATAT AAAGGGTTCTTACAAATGTAATCCAAATGGTACTAAAAACTATAAATGAACAAAAGCTCCAGAATCTAGCATCACATTGT CCCATTGCAGGTCAAGCACCAAAAAGTATTTGCATTCTTGCAAAGTGAAATTCAAGCATCATAATAATCCACTACCAACC TCATTCCTACAAAAATCAAGATCCCATGTCTGAGCCTTACTTGATTTATGATCCTTTGTACCTGAGAATGATCCAACCCA TCTTATACAATCCAGTCAAAAGTACCAGGGACCCTGTTCACTTTGAATAGATTGTGATGTATAAATGGGATAACATTCTA TCTTCCCAAACTGAATCCAATCACATCTTCTTCCTGTTTACTAACTCAAACTACATGAATTGCATTGCTACTAGAACTGA AACCACTGTCGCTTAGAGCTGGATTTGTATGAAAAGCTGACTGTCTTGAAGATTTATTTAGAAGCTTCAGTGACAAGCCT GAAGGTTCAATAGAACCAGGTGGGTCACCGATACTCAGCTTTGAGATGCCTGTTTCATCGATAATATTCATAGGAGCTTT TGGAATCTCAGCCCTTGGCTTAAAAATGTTGGAATTTGGTGGCAATTCTGTTGTAGCAGGCCTAAAACCAGGCCACATTG GGAATGGAAAAGGAAGCAATGGTGCCATGAAACCTGGAAACACCATTGGAACACCACAAGCCATTGCTGCCACACCTTGT GAAAAAGAGGTTTCTGCTTCTGCAGTATTTTCTGAATTATTTGATTCAAATTCCTGATCTGAAGCTGTCTGTGATGATAA TGGGGCACCATTCTTAGACTCAACAAGAGGACCTTGATTAAATGCAGAACTTAGGTTAGTAGGTAAAATCTGGTTTTGGG CAGAGCCATCGCAAACGGTGTGGCCAGTAAGTAGTATCTGATTTTGAGAAGAACTATCACAGACAGTATGGCCAGTAGGT AGTATCTGATTTTGAACAGAGCTATCACAAATAGGATCAATGGAAGAAACTTTTGAATAATCTTCTACTGATACTGCTGT TGCACTGGGATCCGGTGTCATGTCAAACAGACTGGAACGTCTCTTCCTTCTAGTCATATTGCTCTGTCGAATAAAATATT TCTGTGCATGGCTGGCTACCTGTGTAGGTGTTCGTGTTATGACAAAATTCCGTGCTATTCCTCTCCAATCACCTTTGCCA AGCTTCTGCAAACCTAGCAAAAACATTCTATGTTCTTCCTCTGTCCATGGCACACCTTTCTTCCTCTCGCGAGAATTGGA GGAGGTGGAGGCCTCCACGAGGCCATCGGAGAGATAGCCGTCGGCAGCCGCGGCTGCAGCAGCGGCAGCGGCAGAGGCCG GCTCGGAGGGGTCAGCGGGAGAGCTAGGGCTGGCCATCATCATCAAATTCCCCATGCTTGCGCTCTTTCTGATCGGGCCA TCGGTGAGCCGAACGCCGAAGAGCTTCACCCCGCCGCGGTTAGGGCACGTCCTGGAGTTGTGCCCATTATTGCCGCAGTG CGAGCACTTGCGCGTCATCTTCTCAATCCTTGTTACTCAGGAGGATTCAAATCGGCCTCTGCGATTCGATCCTGCGACCA ATCTGTAACGAAAGAAAAGAAGGAGTCCAAAACCGCGTGATGCTGCAGAGGATGAATGCAGCCTGGGAAGCATCTGAGGG AAGGAAGTCGTGCTGTCATTTGAATAAAAAGAGAGAAAAAACTCCACAGCAAGAAGAAGAC |
| Full Translation: | LLLAVEFFLSFYSNDSTTSFPQMLPRLHSSSAASRGFGLLLFFRYRLVAGSNRRGRFESS*VTRIEKMTRKCSHCGNNGH NSRTCPNRGGVKLFGVRLTDGPIRKSASMGNLMMMASPSSPADPSEPASAAAAAAAAAADGYLSDGLVEASTSSNSRERK KGVPWTEEEHRMFLLGLQKLGKGDWRGIARNFVITRTPTQVASHAQKYFIRQSNMTRRKRRSSLFDMTPDPSATAVSVED YSKVSSIDPICDSSVQNQILPTGHTVCDSSSQNQILLTGHTVCDGSAQNQILPTNLSSAFNQGPLVESKNGAPLSSQTAS DQEFESNNSENTAEAETSFSQGVAAMACGVPMVFPGFMAPLLPFPFPMWPGFRPATTELPPNSNIFKPRAEIPKAPMNII DETGISKLSIGDPPGSIEPSGLSLKLLNKSSRQSAFHTNPALSDSGFSSSSNAIHVV*VSKQEEDVIGFSLGR*NVIPFI HHNLFKVNRVPGTFDWIV*DGLDHSQVQRIINQVRLRHGILIFVGMRLVVDYYDA*ISLCKNANTFWCLTCNGTM*C*IL ELLFIYSF*YHLDYICKNPLYHLRT*GEKRLITILSSQVVTAA*GDRPW*QQGLLV*WGGLCLLIRILQADSWGYFPTKR MLPDIRRRGSPFD*WGSWVFFLISKKNKHDACKTGIHALYCRLQLFSFYRKTKKLNFFLGHNIINESYQRICP |
| Longest Translation Frame: | -3 |
| Longest ORF: | VTRIEKMTRKCSHCGNNGHNSRTCPNRGGVKLFGVRLTDGPIRKSASMGNLMMMASPSSPADPSEPASAAAAAAAAAADG YLSDGLVEASTSSNSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNFVITRTPTQVASHAQKYFIRQSNMTRRKRR SSLFDMTPDPSATAVSVEDYSKVSSIDPICDSSVQNQILPTGHTVCDSSSQNQILLTGHTVCDGSAQNQILPTNLSSAFN QGPLVESKNGAPLSSQTASDQEFESNNSENTAEAETSFSQGVAAMACGVPMVFPGFMAPLLPFPFPMWPGFRPATTELPP NSNIFKPRAEIPKAPMNIIDETGISKLSIGDPPGSIEPSGLSLKLLNKSSRQSAFHTNPALSDSGFSSSSNAIHVV |
| Max ORF Length: | 396 |
Gene Ontology
| Molecular Function by blast | Biological Process by blast | Cell Component by blast |
|---|---|---|
| GO:0003677 DNA binding GO:0008270 zinc ion binding GO:0016301 kinase activity | GO:0045449 regulation of transcription GO:0009651 response to salt stress GO:0009723 response to ethylene stimulus GO:0009739 response to gibberellic acid stimulus GO:0009737 response to abscisic acid stimulus GO:0009751 response to salicylic acid stimulus GO:0046686 response to cadmium ion GO:0009753 response to jasmonic acid stimulus GO:0006355 regulation of transcription, DNA-dependent GO:0009733 response to auxin stimulus | GO:0005634 nucleus GO:0005739 mitochondrion GO:0031966 mitochondrial membrane GO:0045279 NADH dehydrogenase complex (ubiquinone) |
Arabidopsis Gene Index v13.0
| Description | Blastn Hit Id | Blastn e-value |
|---|---|---|
| UP|Q9LVS0_ARATH (Q9LVS0) Myb-related transcription activator-like (MYB transcription factor), complete | TC300443 | 9.8e-46 |
Pine Gene Index v6.0
| Description | Blastn Hit Id | Blastn e-value |
|---|---|---|
| similar to UP|Q41240 (Q41240) MybSt1, partial (40%) | TC67566 | 0 |
Spruce Gene Index v2.0
| Description | Blastn Hit Id | Blastn e-value |
|---|---|---|
| similar to UP|Q41240_SOLTU (Q41240) MybSt1, partial (47%) /QuerySize=2009 | TC12781 | 0 |
Pfam
| Description | Hit Id | e-value |
|---|---|---|
| US22 like | PF02393 | 4.40e-54 |
SMART
| Description | Hit Id | e-value |
|---|---|---|
| nik_2 | SM00036 | 6.90e-44 |