MNC5697104

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
Contig10085 MN5157563 GQ0011.TB_G11 GQ0011_G11 GQ0011.B3.r_G11 GQ03210_D19 GQ03210_D19

BLAST

Blastx Description Blastx Hit Id Blastx e-value
F28N24.15 protein UniRef100_Q9LP45 6.00616e-104

Unigene

Unigene Id: 15996
Unigene Sequence: TTTGTATTAGTTTCTAACAACACAGTTTACAAAGACTTATTTCAGCTTAACTGAGCATCTGCCTCCCGCTCAGGCCGAGG
AGTTGATTTTCTAAAATAATTCCTGCAATTTAATTTTCAGTTTAAAGACAATCAAAATTACTCCGGTATAGAGATGATGC
TCAAAAAATATAAAAGATAACGAGGCAATGATTTTGGCACTTCATACTGCATCAATGACACAGACACTGCAATTATGAGT
G*TCACATTAGACTGG*AAGAAATTGCCCTTCAGTAGTTTATATAAAATCCATAACATGCAATGCAAAGTAAATTTAGGC
CATGATCTTAGCTGACTTCAAGTAAAGGCTGTCTACAACTTTGCTAATGTTTGAAATAGTTTCCAAAGTAGCAGAGAAAA
TGCCATCTGGCTTTTGATCTTCAAAAATAATGAGGCAACCTGCACCCTGATCAAGTGTACCAGCAAATTTTCGCTCCAAA
ATCATCTGGGACAGCTTATTTTCCACAGTATCCATGGGCAATCCAATCAACTCTGCTATATGCAATATTTCAACCCTTGA
AAAAGGTTCGATTAAACGGCAGAGATTCTGCTCCAGAAGAGTGTCATATAGAGAAGACAAGTGTCTGTGAACAATGGGGT
CTTCCTCTAGTTGTGCCTGGTAAGCTTTTAGTGCAACTTCAAAATCTTTCAAAGAGCGTTTTGAGTGTGCATCTGCAACA
GCCTTCATGGCATCCAACTCCACTCCCATATAGAGCAGCCCTGCCTTTGAAGAAATAAGCCCTGCAACATCATCTGCTTG
GTTAACCATTATCTTGCAAAGAAGCATATACTTCAAACTGAACACTGCACGAGGATCCTCAAGTGCATTAAAAGCCTCAA
ATGCCTCGAAAAAGTAGCTAAATGCTGTTTTATAATCCTTCTCCTCAGCATGAAGGATTCCACTCTGGAGATCAATAGTC
CCCTGTTGAGCAGGCGGAACATATATCGCATTTGCAGCTGTTCTGGCTGCAGTTAGGGCAGCCTTGGCCTTTGGAAGATT
TCTCAAAGAAAAGTGAAGCTTACACTCCAATAAATCAATATCAACAAGAAGCAGTTTATCATCCAGCCTCCTAACTTCTT
TTACAAGACCAGAAATGAGAGTCAAAGCTTCCGAGTACTCTTTGCTTTCCATTAATAAAGCAGCAAGCCTTGCTTCAACC
CTCTGCCTTAAAAATGTTCGTTTCTCCAAACGGGTCCATTCCACCATTTCCCTACACAGAGATATCTGAAGCTGTGATGT
TCCTGGGATCTTTGCAACCGCATCAAGTACTCCTCTGACAATCTTAGCAGTCTTCGCCTTTGGAATCAGTGAAAAGAAGG
GGCGTAGAACTGTAAGGAGACTCTTCAGCTCCTCTCCCCTCTTCTCCTGTGTGAGAAGATCAGAAAGGTTTGAAATCGCC
TGTTCTTTGATCCGAAGAGACTCAGCTGAAGATGAAGGATTCTCAATTATCTGACGAAGAATAGAAATAGCCCCTGCAGG
GTCAGTGCCCTTGATGTCCAAGGCATGACTGAGAGACTCTGTGGTTGCAGGGATAGTAGACATTGCTCCGATAATCAGAG
GACCAACTCTGCTGCTCTCAAGTGGTCGATCCACGAACGTGAACTAAAAGATCCAGCAACCGCTAAGAAAGCTTATTTTT
CATAGACGCGTTGTGGGTTTGTGTCTG
Full Translation: RHKPTTRL*KISFLSGCWIF*FTFVDRPLESSRVGPLIIGAMSTIPATTESLSHALDIKGTDPAGAISILRQIIENPSSS
AESLRIKEQAISNLSDLLTQEKRGEELKSLLTVLRPFFSLIPKAKTAKIVRGVLDAVAKIPGTSQLQISLCREMVEWTRL
EKRTFLRQRVEARLAALLMESKEYSEALTLISGLVKEVRRLDDKLLLVDIDLLECKLHFSLRNLPKAKAALTAARTAANA
IYVPPAQQGTIDLQSGILHAEEKDYKTAFSYFFEAFEAFNALEDPRAVFSLKYMLLCKIMVNQADDVAGLISSKAGLLYM
GVELDAMKAVADAHSKRSLKDFEVALKAYQAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEILHIAELIGLPMDT
VENKLSQMILERKFAGTLDQGAGCLIIFEDQKPDGIFSATLETISNISKVVDSLYLKSAKIMA*IYFALHVMDFI*TTEG
QFLXSLM*XLIIAVSVSLMQYEVPKSLPRYLLYFLSIISIPE*F*LSLN*KLNCRNYFRKSTPRPEREADAQLS*NKSL*
TVLLETNT
Longest Translation Frame: -2
Longest ORF: FTFVDRPLESSRVGPLIIGAMSTIPATTESLSHALDIKGTDPAGAISILRQIIENPSSSAESLRIKEQAISNLSDLLTQE
KRGEELKSLLTVLRPFFSLIPKAKTAKIVRGVLDAVAKIPGTSQLQISLCREMVEWTRLEKRTFLRQRVEARLAALLMES
KEYSEALTLISGLVKEVRRLDDKLLLVDIDLLECKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAE
EKDYKTAFSYFFEAFEAFNALEDPRAVFSLKYMLLCKIMVNQADDVAGLISSKAGLLYMGVELDAMKAVADAHSKRSLKD
FEVALKAYQAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEILHIAELIGLPMDTVENKLSQMILERKFAGTLDQG
AGCLIIFEDQKPDGIFSATLETISNISKVVDSLYLKSAKIMA
Max ORF Length: 442

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
GO:0005488 binding GO:0005198 structural molecule activity GO:0003714 transcription corepressor activity GO:0005515 protein binding GO:0004871 signal transducer activity GO:0003677 DNA binding GO:0030163 protein catabolic process GO:0006350 transcription GO:0006355 regulation of transcription, DNA-dependent GO:0030154 cell differentiation GO:0006511 ubiquitin-dependent protein catabolic process GO:0006366 transcription from RNA polymerase II promoter GO:0008283 cell proliferation GO:0016481 negative regulation of transcription GO:0007165 signal transduction GO:0007275 multicellular organismal development GO:0005634 nucleus GO:0005829 cytosol GO:0043234 protein complex GO:0000502 proteasome complex (sensu Eukaryota) GO:0008541 proteasome regulatory particle, lid subcomplex (sensu Eukaryota) GO:0005737 cytoplasm GO:0008180 signalosome complex

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
similar to UP|Q6XJG1 (Q6XJG1) 26S proteasome subunit RPN6a (Fragment), complete TC59661 0

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
similar to UP|Q6XJG1_ARATH (Q6XJG1) 26S proteasome subunit RPN6a (Fragment), complete /QuerySize=1827 TC12609 0

Pfam

Description Hit Id e-value
PCI domain PF01399 2.10e-63

SMART

Description Hit Id e-value
PINT SM00753 1.30e-90