MNC5695675

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
Contig8656 MN5157531,MN5194107 GQ0011.TB_E03,GQ0048.TB_I18 GQ0011_E03,GQ0048_I18 GQ0011.BR_E03 GQ03105_I22 GQ03105_I22

BLAST

Blastx Description Blastx Hit Id Blastx e-value
FVE UniRef100_Q52ZH8 1.07459e-66

Unigene

Unigene Id: 14567
Unigene Sequence: GACTTTTGCTTTAGTGGTTATCACCCATATAATATTGGTCACGACTTTGGATTGGACTAAAAGCTGATCACAGCTTTGGA
CATCCTTCTATTAGATTTCCTTTACATGGGAAGATCAACATCTTTCCATTACCATTGTATCTATAAGAAAAAGTTGACAG
TAGTAAAAGCATAATTAACACTCTTGCATGACCACAAAGCAAACATTTACATTGGCTAGTTTACTTTATAGACAATTACG
AAAAATAAAGTACTGAAGTACACGTGACATTATCTACTTGTTTTGACAAGAAAGAATGTGAGAACGGAATCTTTCGAGCT
CTGCCAAAACCTCATCTTCAGGCCTGTATATCAAATCACTCATTCGCCAAATCTGTAATGTTCCTCCTCCACCAGTACTC
TCACCATCATCAGATACACTGACAATGGTCCATGGATCAAAACTGTTCCAATGAAAGTCAACCACCTTATCCCTATGCCC
TGCATGCTGGAAGAAAAGTCCAGGCGGTGTTTTCTTACCAACATTCTTTCCAACCTTCTCATAATCCCACACATTTAAGT
AACTATCCTCTGCTGCACTTCCAAACACGGATGCTTTGTCTGGACACCACTGCACACAAAGCACAGGAGCTGAATGACCT
TCAAATTTATGCACAGGTGAGCCAACCCCACTGGATGTAAGATGCCGGCGGTCAAACATGCGCACTGAGTTATCAGCAGA
CCCAGTCAAGATCAGATTCTCATTATGAGGATTCCAATCGACACAATGAAGGTCAGCATTATGCGCTTTCTCAACCTTGA
TAACTGGTTCATTACCAGTTCGAGCATCCCACAAAATAAGAGCAGAGTCATCTCCCACGCTACAAAATTCCTGTGCATTT
GAAGGACAAAATTGCACATCTTCAACTGTATCTTTATGCCCTTTGTAGACACCTCTAGGACCTACTGAAGGGATCTTT
Full Translation: KIPSVGPRGVYKGHKDTVEDVQFCPSNAQEFCSVGDDSALILWDARTGNEPVIKVEKAHNADLHCVDWNPHNENLILTGS
ADNSVRMFDRRHLTSSGVGSPVHKFEGHSAPVLCVQWCPDKASVFGSAAEDSYLNVWDYEKVGKNVGKKTPPGLFFQHAG
HRDKVVDFHWNSFDPWTIVSVSDDGESTGGGGTLQIWRMSDLIYRPEDEVLAELERFRSHILSCQNK*IMSRVLQYFIFR
NCL*SKLANVNVCFVVMQEC*LCFYYCQLFLIDTMVMERC*SSHVKEI**KDVQSCDQLLVQSKVVTNIIWVITTKAKV
Longest Translation Frame: -2
Longest ORF: KIPSVGPRGVYKGHKDTVEDVQFCPSNAQEFCSVGDDSALILWDARTGNEPVIKVEKAHNADLHCVDWNPHNENLILTGS
ADNSVRMFDRRHLTSSGVGSPVHKFEGHSAPVLCVQWCPDKASVFGSAAEDSYLNVWDYEKVGKNVGKKTPPGLFFQHAG
HRDKVVDFHWNSFDPWTIVSVSDDGESTGGGGTLQIWRMSDLIYRPEDEVLAELERFRSHILSCQNK
Max ORF Length: 227

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
GO:0005515 protein binding GO:0016564 transcriptional repressor activity GO:0035035 histone acetyltransferase binding GO:0046974 histone lysine N-methyltransferase activity (H3-K9 specific) GO:0046976 histone lysine N-methyltransferase activity (H3-K27 specific) GO:0042826 histone deacetylase binding GO:0042393 histone binding GO:0004402 histone acetyltransferase activity GO:0016740 transferase activity GO:0031072 heat shock protein binding GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0006338 chromatin remodeling GO:0007275 multicellular organismal development GO:0008283 cell proliferation GO:0000910 cytokinesis GO:0006342 chromatin silencing GO:0006350 transcription GO:0016571 histone methylation GO:0016573 histone acetylation GO:0042766 nucleosome mobilization GO:0005634 nucleus GO:0016581 NuRD complex GO:0005667 transcription factor complex GO:0005700 polytene chromosome GO:0016589 NURF complex GO:0031523 Myb complex GO:0035098 ESC/E(Z) complex GO:0005829 cytosol GO:0031511 Mis6-Sim4 complex GO:0000118 histone deacetylase complex

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
GB|CAB45333.1|5123567|ATT16L4 WD-40 repeat-like protein {Arabidopsis thaliana} (exp=0; wgp=1; cg=0), complete TC285087 0

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
similar to UP|MSI4_ARATH (O22607) WD-40 repeat protein MSI4, partial (81%) TC67012 0

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
similar to UP|Q52ZH8_PEA (Q52ZH8) FVE, partial (41%) /QuerySize=1024 TC23974 0

Pfam

Description Hit Id e-value
WD domain, G-beta repeat PF00400 2.80e-36

SMART

Description Hit Id e-value
WD40_4 SM00320 5.00e-40