MNC5695367

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
Contig8348 MN5157539,MN5234172 GQ0011.TB_E11,GQ0202.TB_B12 GQ0011_E11,GQ0202_B12 GQ0011.BR_E11 GQ03316_K22 GQ03316_K22

BLAST

Blastx Description Blastx Hit Id Blastx e-value
N/A N/A N/A

Unigene

Unigene Id: 14259
Unigene Sequence: GTGAACTAAATACCACTGTATATCATAACGAAAACCAAAAGGCATTAGCCATAACAGTAGAGCAAAGCCAAAATAAGAGT
ACCGAGTACCTCTACACTCGTGATGCAGATCACCAATGCTGTTTCCTCTCTCCCCTATCCCACTTTTCATATGAAAATAT
TTATCATCAGAAGATATACAAACCCCCATATCCCATTTTCAAATGAAGATACTCATACTCGGGAAGATATACAGAGCAGA
ACCCAACACGAAATCAGCACAGAGACTCTGGAACTCGTAATCAGAAAAACGCGCTGAGAAAATAAATGTATCTTCTTGTT
AAGCTTAAGCTTTCTGTAGATTAGTAGAGACACACTTCTGCAATGACTGTACAACATGAATTGTTTGGTCAAAAATAGCT
TCTTTGCTTCGCAATTCACTACCTAGCATGCTGCTTAATGCCTTCAATCTTTTCTCAATTCTGTCCGCTTTCGATTGACA
ATGGACATCTGGCATTAATTCCTCTTCCACCTCTCCATCTTCATCTGCATTACGCTTGCGTTTTCCTGGATTTTCGGAGG
GAAAACAAGAGGCGACTTCGTTTGAGGAAGCGCTGCAACAGCCGGCTTCTGCAGCATCGGAGAAGGTAAGAGAGCTGGTT
GCCTCATCATCTTCTTCATAGTCTTCATCTAAATCGAGCAAAGCATCAAGTTCTTCAGAATCTTCGTCAAAATAAGAACT
ATCAGTATCAGATTCCTCAGCATCTTGGTCAAAGTAAGAATTAGAGCCTTCAGATCCAGACAGATTGTTATTTTTTAGTA
CATCAATGTCAGTACTCGAAACAATGCCGCGCCTGACATCGGAATTGAGAGAACACAAAGGCGAAGACAATGCTCTTGTG
GCCTTGACATTTTCATAGGCCGTAATCCCTGAAGCCAGCGTCTCATGAAAACACCGCCATTCTGAACTTGGTTCATGCGT
AGAATGGCAGAAAACCCTCGTTGAATCGCCAGTCCTGTCAAATATCAAATATCCTTTTGAAGGCAAATACTCCGGCTTCT
TTAGCGTCGTCGCATCATTAGGCTCCGGCTTTAATAACGAAACGGTAGCAGAAAGGTCGTCCAGCGGCTCCATGGAAAAG
CTTTTCTCAGTCAACTTTATGGGGACTGTGCCCTTAAAGACCTGAAC
Full Translation: VQVFKGTVPIKLTEKSFSMEPLDDLSATVSLLKPEPNDATTLKKPEYLPSKGYLIFDRTGDSTRVFCHSTHEPSSEWRCF
HETLASGITAYENVKATRALSSPLCSLNSDVRRGIVSSTDIDVLKNNNLSGSEGSNSYFDQDAEESDTDSSYFDEDSEEL
DALLDLDEDYEEDDEATSSLTFSDAAEAGCCSASSNEVASCFPSENPGKRKRNADEDGEVEEELMPDVHCQSKADRIEKR
LKALSSMLGSELRSKEAIFDQTIHVVQSLQKCVSTNLQKA*A*QEDTFIFSARFSDYEFQSLCADFVLGSALYIFPSMSI
FI*KWDMGVCISSDDKYFHMKSGIGERGNSIGDLHHECRGTRYSYFGFALLLWLMPFGFRYDIQWYLVH
Longest Translation Frame: -1
Longest ORF: VQVFKGTVPIKLTEKSFSMEPLDDLSATVSLLKPEPNDATTLKKPEYLPSKGYLIFDRTGDSTRVFCHSTHEPSSEWRCF
HETLASGITAYENVKATRALSSPLCSLNSDVRRGIVSSTDIDVLKNNNLSGSEGSNSYFDQDAEESDTDSSYFDEDSEEL
DALLDLDEDYEEDDEATSSLTFSDAAEAGCCSASSNEVASCFPSENPGKRKRNADEDGEVEEELMPDVHCQSKADRIEKR
LKALSSMLGSELRSKEAIFDQTIHVVQSLQKCVSTNLQKA
Max ORF Length: 280

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
N/A N/A N/A

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
UP|Q9SYP1_ARATH (Q9SYP1) F9H16.5 protein, complete TC283438 7.9e-08

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
weakly similar to GB|AAA35091.1|295671|YSCSRP40X selected as a weak suppressor of a mutant of the subunit AC40 of DNA dependant RNA polymerase I and I TC61737 0

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
similar to UP|ZCH10_MOUSE (Q9CX48) Zinc finger CCHC domain-containing protein 10, partial (20%) /QuerySize=1066 TC38726 0

Pfam

Description Hit Id e-value
Yeast cortical protein KAR9 PF08580 2.00e-37

SMART

Description Hit Id e-value
riboneu5 SM00535 5.70e-26