MNC5694699

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
Contig7680 MN5157592,MN5263596 GQ0011.BR_I17,GQ0254.B7_I02 GQ0011_I17,GQ0254_I02 GQ0011.BR_I17 GQ0011_I17 GQ0011_I17

BLAST

Blastx Description Blastx Hit Id Blastx e-value
N/A N/A N/A

Unigene

Unigene Id: 13591
Unigene Sequence: TTTTCTGTAATATGCATGATTTTATTATAATATCAATTATAACAACAAAACAAACTGCTCAGTGAATCTCGCAGGCCTTC
CACACAAGGGTGGAGCAGTCTCCAGAGAAAAGAATATGAATCATTCTGATGAAACAATGAAGCAAAGAAGAGACTTTCAA
CTACCAGAGGGAAACAACATTGAAGCCTACAGAAAGAAGGTGGCCAGAGCGGCTCCAAAGATGACCATATTCTCCAACTT
GACAATGCTTCCTCCAGAGGGAGTACTGGTAGGGGGAGCAACAGGGGCAGGGGATGATCCTGAGGGAGCAACAGTTGGTG
GACTTGGGGGGCTTGCATTAGGGGATGTCGAAGGGGGGGTGGCAATAGGGGGGGAGGTGGCAGGAGCAGGAGTAACAGCA
GTGGGAGCTGGAGTAGAAGCAGGAGGAGGAGTTGCTGGGCTAGGGGCTGGAGCAGCCTTAGGAGAAACTGTAGGGGCAGG
AGGAGGGGATACAGTTGGGGAACTTGCAGGAGCAGGGCCTGTAGTTGATGTCTTGGGTGCTGCAGATGGAGCCTTGGGTG
TTGCAGCCGGAGCCGTGGATTTTGCAGACGGAGCCTTCGCTGGGGAGGCTGAGGGACTCTGTGCCCAACAGCTTCCACCC
ATCAGACCCAAAATGAGTGCCACTGTAATCATCATGTTCAACGCTGCCATTGTCTTGAGATGATCTATCAATCCCCACAG
AGAGTTTCAATGTTCAAAACCCCAAAAAAACGCACAACAATGTTATCAGATCAGAGCTGATTGCTGGAACTGAAGGCCTG
CTGTTCTCAAATTCAGAGGGCTGGAGTGATTATGTAGAAGGAGATTGATTAACACCGCCCTTGAATGCTTGACTGGTCTG
GGCTTATGTAGAAGGAGATTGATTACCACTGCCCTTGAATGCTTGATTGGTCTGGGCTTAAAATATAAGGGCTCCGTTGC
AGGCCAGCTGCAATCTTCGTGGCCGACTGGGTCCCAAATATAACAAATCCAACTAAAATAAAACAAGTATGGCACAATTC
CCCGCCTTGCAGGGCCTAGAAAACGTGTGCTGAGGCCTTTGGAAATCGTTTCCC
Full Translation: FL*YA*FYYNINYNNKTNCSVNLAGLPHKGGAVSREKNMNHSDETMKQRRDFQLPEGNNIEAYRKKVARAAPKMTIFSNL
TMLPPEGVLVGGATGAGDDPEGATVGGLGGLALGDVEGGVAIGGEVAGAGVTAVGAGVEAGGGVAGLGAGAALGETVGAG
GGDTVGELAGAGPVVDVLGAADGALGVAAGAVDFADGAFAGEAEGLCAQQLPPIRPKMSATVIIMFNAAIVLR*SINPHR
EFQCSKPQKNAQQCYQIRADCWN*RPAVLKFRGLE*LCRRRLINTALECLTGLGLCRRRLITTALECLIGLGLKYKGSVA
GQLQSSWPTGSQI*QIQLK*NKYGTIPRLAGPRKRVLRPLEIVS
Longest Translation Frame: +2
Longest ORF: FYYNINYNNKTNCSVNLAGLPHKGGAVSREKNMNHSDETMKQRRDFQLPEGNNIEAYRKKVARAAPKMTIFSNLTMLPPE
GVLVGGATGAGDDPEGATVGGLGGLALGDVEGGVAIGGEVAGAGVTAVGAGVEAGGGVAGLGAGAALGETVGAGGGDTVG
ELAGAGPVVDVLGAADGALGVAAGAVDFADGAFAGEAEGLCAQQLPPIRPKMSATVIIMFNAAIVLR
Max ORF Length: 227

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
N/A N/A N/A

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
similar to GB|AAM78064.1|21928071|AY125554 At2g14890/T26I20.5 {Arabidopsis thaliana} (exp=-1; wgp=0; cg=0), partial (79%) TC297154 8.1e-12

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
weakly similar to UP|Q39763 (Q39763) Proline-rich cell wall protein, partial (17%) TC59800 0

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
weakly similar to UP|Q9C5S0_ARATH (Q9C5S0) At2g14890, partial (24%) /QuerySize=1113 TC40366 0

Pfam

Description Hit Id e-value
Minor capsid protein VI PF02993 5.50e-33

SMART

Description Hit Id e-value
WR1_2 SM00289 3.30e-21