MNC5693216

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
Contig6197 MN5157589 GQ0011.TB_I13 GQ0011_I13 GQ0011.B3.r_I13 GQ0133_K12 GQ0133_K12

BLAST

Blastx Description Blastx Hit Id Blastx e-value
Glycosyl hydrolase family 10 protein, expressed UniRef100_Q10P81 1.50207e-52

Unigene

Unigene Id: 12108
Unigene Sequence: CGATCTTGTCTCCGAGGAGGGATCATAAAATATTCATAAATATTTNCGGAAATCATATTCACAAGAGTCATAAAAAAACC
GCAAGCAATGGCTGACAGGACAGTCAGATTTTAGCTTGTGAGAAATTAGGAAAAAGCTGAACTAAACTCTACCTTCACTA
AAATAGTTAGACAAGAAGATCAATGTGTTGTGGTTGGTCTGCAGCAGTTGCATCCATGGAGACCTTGAAAGAAGCGGTAC
TAGTAATGTTGGAATGCGTTACAGTGGCCGTATACTCCCCAAAAAATCCTGAGAAGTTGAAAGTCCCGCTGTTATCAGTG
AACCCACTAATGCCCGTGGTAATCCATTCTTCCATCAATTTGTCCACCACATCTCCTGTTGGAAGATTGTTGAAATTATC
GTCTGTGAGACACATCCTGTAACACCCGTAGGGATGCAATGCCGACCACATAACGATACCATTCACAGCCGGGTGAGAAA
ATGCTTCGCGCAATACCTGGTCCAAGTACTCGCCCTGTTTGGTTTGGTTCCCGATATTTGTAATATCGACTTCTGTAAGC
CAGATTGGTAAACCCGTAGAGCCCAATTTGTCTAATACAGAGCGCATGAATGGTATATTGGGCTTTGAAAAATGGGATTC
CAACCCTATTCCTTCCATGAGCAATGGCTGGCTTATGTCACTGAGTTTCTTCAGATATTCATCGGGTGTGGCCTTCATGT
CGTTGCAGGTCTCGATTGTATTATAGTCGTTCATGAACATTGGGGTGGATGGATCCAATTGCTGGGCGAGTTGGAAGAAA
TTAGCGGAGGCATTGGGTCCTAACTTGTCTTCAAAGAATGAAAAATGAAGCATCTCGTTGCTCACGTCCCAACTGAGAAA
TTGACCCTTGTATCTTCCCACTAATGAACGAATCCGAGAGTCCACCGCCTGTTGGAGTTGCTCGGCATCGAGGTTCTTC
Full Translation: KNLDAEQLQQAVDSRIRSLVGRYKGQFLSWDVSNEMLHFSFFEDKLGPNASANFFQLAQQLDPSTPMFMNDYNTIETCND
MKATPDEYLKKLSDISQPLLMEGIGLESHFSKPNIPFMRSVLDKLGSTGLPIWLTEVDITNIGNQTKQGEYLDQVLREAF
SHPAVNGIVMWSALHPYGCYRMCLTDDNFNNLPTGDVVDKLMEEWITTGISGFTDNSGTFNFSGFFGEYTATVTHSNITS
TASFKVSMDATAADQPQHIDLLV*LF**R*SLVQLFPNFSQAKI*LSCQPLLAVFL*LL*I*FPXIFMNIL*SLLGDKI
Longest Translation Frame: -2
Longest ORF: KNLDAEQLQQAVDSRIRSLVGRYKGQFLSWDVSNEMLHFSFFEDKLGPNASANFFQLAQQLDPSTPMFMNDYNTIETCND
MKATPDEYLKKLSDISQPLLMEGIGLESHFSKPNIPFMRSVLDKLGSTGLPIWLTEVDITNIGNQTKQGEYLDQVLREAF
SHPAVNGIVMWSALHPYGCYRMCLTDDNFNNLPTGDVVDKLMEEWITTGISGFTDNSGTFNFSGFFGEYTATVTHSNITS
TASFKVSMDATAADQPQHIDLLV
Max ORF Length: 263

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
GO:0016787 hydrolase activity GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169 cation binding GO:0003824 catalytic activity GO:0031176 endo-1,4-beta-xylanase activity GO:0016798 hydrolase activity, acting on glycosyl bonds GO:0030247 polysaccharide binding GO:0030248 cellulose binding GO:0016162 cellulose 1,4-beta-cellobiosidase activity GO:0030246 carbohydrate binding GO:0005975 carbohydrate metabolic process GO:0008152 metabolic process GO:0045493 xylan catabolic process GO:0000272 polysaccharide catabolic process GO:0005576 extracellular region

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
UP|Q84VX1_ARATH (Q84VX1) At4g38650, partial (75%) TC286894 0.000124

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
N/A CX649823 0.005795

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
weakly similar to UP|Q84VX1_ARATH (Q84VX1) At4g38650, partial (17%) /QuerySize=678 TC28337 0

Pfam

Description Hit Id e-value
Glycosyl hydrolase family 10 PF00331 7.90e-35

SMART

Description Hit Id e-value
ptp_7 SM00404 6.00e-18