MNC5692352
EST
| ForestTreeDB Contig(dir8): | MN ESTs: | GQ Reads: | GQ Clones: | GCAT 2.0 Clusters: | GCAT 3.0 Clusters: | GCAT 3.1 Clusters: |
|---|---|---|---|---|---|---|
| Contig5333 | MN5157510 | GQ0011.BR_C07 | GQ0011_C07 | GQ0011.B3.r_C07 | GQ0011_C07 | GQ0011_C07 |
BLAST
| Blastx Description | Blastx Hit Id | Blastx e-value |
|---|---|---|
| N/A | N/A | N/A |
Unigene
| Unigene Id: | 11244 |
|---|---|
| Unigene Sequence: | TTTGGATTCTTCATTTTGCCAAAGATTTGTGAATATAATCATGGGAAAGGTAAAGAAACAAGCATGGCTTAGTGAGCTTG AGGAAATCAACCAAACCATTC*AAGCATAGAACGCTAAATTGAGGAGGTTGCTTCAAGAATCTAAAGAAGAAAAGAGCAA ACTACGATTGCAGTGACAAGCTACAGAGGAACAAGTTGGGGAATGCTCTGCTACAGGAGAAGCAAAAAGTCCCTCCAAGA CTAAACAAACTTGTGGCCATAGTAGGTATACTAGTTATGGTTCTTGTGATGAAAATGTTGATAGCTGCACATATTGTTAG ATGATAGAGGATGCTCTTCAGGCACTAGGGAACCAAGGTGGTTTCATAGAAGCCTCATCTACAACTTCATCCAACCAGGG *GGAGTAGTTGGCCAACCTTCAAGAAGATGATCAAGTGTTCGAAACATGAATGGAGGTAAATGTTAGGGTCCTAACCCGC ACATAGGTAGAACAATATATTCAGATGTAATAAAGGTCAATATTAATAAGGCCTTGCAATAAAATAGAATAAGTCGAATG TAAGAAGACCTAATAGAAGCTTCCGCTTCTAGAAGGATCTTCCTCTAGATGCTTCTTTTGATAGACATATTTAGTATAAA TAGGAGTCGAGGGTATGAGAACCCCAGCTTGGAGATTATTGTAATAGAGCTCTGCTCGACTGGAGGTTGCCCCCTCGAAG AGGCCC |
| Full Translation: | FGFFILPKICEYNHGKGKETSMA**A*GNQPNHXKHRTLN*GGCFKNLKKKRANYDCSDKLQRNKLGNALLQEKQKVPPR LNKLVAIVGILVMVLVMKMLIAAHIVR**RMLFRH*GTKVVS*KPHLQLHPTRXE*LANLQEDDQVFET*MEVNVRVLTR T*VEQYIQM**RSILIRPCNKIE*VECKKT**KLPLLEGSSSRCFF**TYLV*IGVEGMRTPAWRLL**SSARLEVAPSK RP |
| Longest Translation Frame: | +1 |
| Longest ORF: | GGCFKNLKKKRANYDCSDKLQRNKLGNALLQEKQKVPPRLNKLVAIVGILVMVLVMKMLIAAHIVR |
| Max ORF Length: | 66 |
Gene Ontology
| Molecular Function by blast | Biological Process by blast | Cell Component by blast |
|---|---|---|
| N/A | N/A | N/A |
Arabidopsis Gene Index v13.0
| Description | Blastn Hit Id | Blastn e-value |
|---|---|---|
| N/A | N/A | N/A |
Pine Gene Index v6.0
| Description | Blastn Hit Id | Blastn e-value |
|---|---|---|
| N/A | TC78995 | 1.9e-09 |
Spruce Gene Index v2.0
| Description | Blastn Hit Id | Blastn e-value |
|---|---|---|
| similar to UP|Q5LRB0_SILPO (Q5LRB0) Rhodanese-like domain protein, partial (13%) /QuerySize=757 | TC28870 | 0 |
Pfam
| Description | Hit Id | e-value |
|---|---|---|
| Mechanosensitive ion channel | PF00924 | 9.70e-21 |
SMART
| Description | Hit Id | e-value |
|---|---|---|
| FBG_2 | SM00186 | 2.60e-18 |