MNC5692033

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
Contig5014 MN5157550 GQ0011.BR_E23 GQ0011_E23 GQ0011.B3.r_E23 GQ02816_H24 GQ02816_H24

BLAST

Blastx Description Blastx Hit Id Blastx e-value
Emb|CAB68134.1 UniRef100_Q9LJU6 2.236e-17

Unigene

Unigene Id: 10925
Unigene Sequence: GGTCAATGCAAAAGTCGGAGATTGTCACCCGGACAGATCAATAAAACGAAAAATAACCATGCGCAGAGTGCTCCCCATGA
GGACAGGCAGAACAGAAACACGGATGTGATTTGAGAGGGAGGATTCTCCTACAGAGCAGAACAGTTGGCAGATCCAGATA
TCTTTGGCATCCGTTGAAGAAGAAGAGCGGGCAACGGCACAGCAACAATGCACGACTTTTGCTTCACAATTCCTTACGGC
TTGGCGGTTATCATAGGAGGGGTGGTGGGATATCTCAGAAAAGGAAGCACAGTTTCTTTGGCGGGAGGTTTGGGAACGGG
GTTGATGTTACTGCTTGCAGGGCAGCTGAGTCTCAAAGCCTTCGAAAAACGCCGCAATTCATATTTCGCCATCTTCCTTC
AGACAGTATGCTCGTCTGCACTGACATGGGTGATGGGGCAGCGATATTTGACGACTTCAAAGATAATGCCTGCTGGTATA
GTGACTGTAATCAGTGCCATGATGACATTATTCTATCTATATAAGATCGCTAAAGGAGGAAATCATATAGGCCCAAAAAA
GGAGTGACTGAAAGTGGGCCAAGGAGAATCATGTAGCCTTGTGAAAGGACTGTAGAAATGGAAAGATGAGAATTTGTTTT
TCACTTTGGCTTATTTTCCATTAGTCTGAGATCTTAAATATAGAAAGTCATTTAGCTATTTTAATATATGAATAGTTTCT
GTTAATACAATCCATCAAATGATGTATTACTTAAAATTTATATTATTGTCATCTATGAGAATGCTGAATATAACTTGAAG
ATCTGT
Full Translation: SMQKSEIVTRTDQ*NEK*PCAECSP*GQAEQKHGCDLRGRILLQSRTVGRSRYLWHPLKKKSGQRHSNNARLLLHNSLRL
GGYHRRGGGISQKRKHSFFGGRFGNGVDVTACRAAESQSLRKTPQFIFRHLPSDSMLVCTDMGDGAAIFDDFKDNACWYS
DCNQCHDDIILSI*DR*RRKSYRPKKGVTESGPRRIM*PCERTVEMER*EFVFHFGLFSISLRS*I*KVI*LF*YMNSFC
*YNPSNDVLLKIYIIVIYENAEYNLKIC
Longest Translation Frame: +3
Longest ORF: GQAEQKHGCDLRGRILLQSRTVGRSRYLWHPLKKKSGQRHSNNARLLLHNSLRLGGYHRRGGGISQKRKHSFFGGRFGNG
VDVTACRAAESQSLRKTPQFIFRHLPSDSMLVCTDMGDGAAIFDDFKDNACWYSDCNQCHDDIILSI
Max ORF Length: 147

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
N/A N/A GO:0016020 membrane GO:0005634 nucleus GO:0005737 cytoplasm GO:0009706 chloroplast inner membrane

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
weakly similar to GB|AAQ65128.1|34365633|BT010505 At3g20510 {Arabidopsis thaliana;} , partial (94%) TC76475 0

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
weakly similar to GB|AAQ65128.1|34365633|BT010505 At3g20510 {Arabidopsis thaliana} (exp=-1; wgp=0; cg=0), partial (94%) /QuerySize=865 TC22104 0

Pfam

Description Hit Id e-value
Transmembrane proteins 14C PF03647 3.40e-62

SMART

Description Hit Id e-value
LamNT_2 SM00136 9.70e-21