MNC5632808

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
MN5252509 GQ02013.TB_C07 GQ02013_C07 GQ02013.B3.r_C07 GQ03216_A16 GQ03216_A16

BLAST

Blastx Description Blastx Hit Id Blastx e-value
Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplast precursor UniRef100_P53535 4.77363e-54

Unigene

Unigene Id: 53985
Unigene Sequence: TTTTATAATACATTTAAAACTTTATACGTATCTGTTTACAGGAAAAAACTGGAGGTGCCCTTTATGATAAGGACTATTAA
ATGCTTTATTCTTTACCAAAATTTCAGTGAATCTAGGGACTGGCATTGGATTAGAACCAGTGAAACCAGACAAAGCTCTG
TAAATACCTGGCGTTTTGGAACTGTGACAACTCACTGACTAGAGAAGCATGTTCATTTTAAATTGCCACATAATTATTTG
TTCTAGGTCACTACCCCATTACAGCACTCTTATTAAACAACCGGTGTTGATAAAAGGGGAGTAATTCTAGGGTAACTTTA
CTTGCTTGACACCCCATATGTCTTTTGCATATTCATGTATTGTTCGGTCACTGCTGAATTTGTATGAACCAGCCGTGTTT
AGGATAGACATCCTTGTCCATTTCTCTTGATCTCCATATGCAGCATCCACCCTCTCTTGGCATTCAACATATGCTGGAAA
GTCTTTGCCAACAAGGAAATAGTCACCTCGACCATAGCCCTCATTCCCTTCAAGAGAATCAATCAAAGGCCTGTAGTCGT
ATTTTCCAAACACCCCGCTCTTGATGTAGTCTTTTGCTTCTTCAAACCTTGGGTCTGGTTTGAACTTGCCTTCTGCTCTC
TCTTTCCTAAGTCCAGCAATTTCATGTGCTCTAGCACCAAACAGAAAGAAATTTTCTTCTCCAACTTCCTCGCGTATTTC
AACATTGGCACCATCCAATGTCCCAATTAAGACACATCCATTCATGGAAAACTTCATGTTGCTGGTTCCACTGGCTTCCA
TTCCAGCAGTACTAATATGTTGAGAAAGTTCGCTTGCAGGAATGAGC
Full Translation: LIPASELSQHISTAGMEASGTSNMKFSMNGCVLIGTLDGANVEIREEVGEENFFLFGARAHEIAGLRKERAEGKFKPDPR
FEEAKDYIKSGVFGKYDYRPLIDSLEGNEGYGRGDYFLVGKDFPAYVECQERVDAAYGDQEKWTRMSILNTAGSYKFSSD
RTIHEYAKDIWGVKQVKLP*NYSPFINTGCLIRVL*WGSDLEQIIMWQFKMNMLL*SVSCHSSKTPGIYRALSGFTGSNP
MPVPRFTEILVKNKAFNSPYHKGHLQFFPVNRYV*SFKCIIK
Longest Translation Frame: -2
Longest ORF: LIPASELSQHISTAGMEASGTSNMKFSMNGCVLIGTLDGANVEIREEVGEENFFLFGARAHEIAGLRKERAEGKFKPDPR
FEEAKDYIKSGVFGKYDYRPLIDSLEGNEGYGRGDYFLVGKDFPAYVECQERVDAAYGDQEKWTRMSILNTAGSYKFSSD
RTIHEYAKDIWGVKQVKLP
Max ORF Length: 179

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
GO:0005515 protein binding GO:0004645 phosphorylase activity GO:0016757 transferase activity, transferring glycosyl groups GO:0030170 pyridoxal phosphate binding GO:0042802 identical protein binding GO:0016597 amino acid binding GO:0008184 glycogen phosphorylase activity GO:0003700 transcription factor activity GO:0043565 sequence-specific DNA binding GO:0009011 starch synthase activity GO:0005975 carbohydrate metabolic process GO:0008152 metabolic process GO:0005980 glycogen catabolic process GO:0005977 glycogen metabolic process GO:0006355 regulation of transcription, DNA-dependent GO:0005737 cytoplasm GO:0005622 intracellular

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
UP|Q9LIB2_ARATH (Q9LIB2) Glycogen phosphorylase B; starch phosphorylase (AT3g29320/MUO10_2), complete TC307490 6.7e-111

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Pfam

Description Hit Id e-value
Carbohydrate phosphorylase PF00343 5.10e-124

SMART

Description Hit Id e-value
rpolaneu7 SM00663 6.00e-20