MNC5631310

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
MN5234166 GQ0204.TB_O06 GQ0204_O06

BLAST

Blastx Description Blastx Hit Id Blastx e-value
ATARP9 (ACTIN-RELATED PROTEIN 9); protein binding UniRef100_UPI000034F2B5 6.80948e-31

Unigene

Unigene Id: 52487
Unigene Sequence: TTATTGACATCTTGAAATAACAGGTGGAAAAGTCAAATTTGCTTATCAACATATCTCTTTTTCCAAGAGTCGAAAGCATT
CAAATAGATCTAAAAAGGAAAAAGCCAGGCAATTCTCAAATGAATAGGAACACCACTTTTCTAAGTTCCCACAATATCAT
ATGCTGCAGCCTTGTATAACTTATAATAACTAATCACATTTAAGAATTAATGTACCAGAAAGCCTGAGTTTGAAGCAAGT
GAGAATCTCTGTACTTTCGACCACTCCCTGTCTTAATTCCACCATGTACCCAATCTTCCCGATGAATCCATTGATCGCGA
CTGAAGTAATCTAGAATACCAAGAATAGCACCACCTTTCCAGGAAACAATTAGTGGGTCTGTCCTCTGCTGCAATACCTC
CACTGTGTCAACAGCTTCATTTGCTGGAATAGCATGCAATACTCTTTCTTCCACTGCACCAACTAGACCTTTTGTCAAAG
CCACTCCACCTACTAGCTGTATGCTAGTGAACAATTTCTTTTGAACGTCTAAACGCCCTGTGGAAAGAATACTATTGGTA
ATAGCCTGAGCAAGACCAACTAGATTGTCTTCTTTTCTGAACTTTTGTGGATAGGACTCACTTGACTCTGGCATAGCCAA
TCCACAATTATAACCTGAAAAGAAAATGTCTGGCCCTTCTGACCTTTTGACAAACTCTGTGTGTGAACTGTCCTCCAACA
TATCCTCATAGTCGTGAAACCAAGGATGGGGAGGAGGTGGGTACTCCTCTGGCATTANAATGGAAGGATAANATAGGCC
Full Translation: GLXYPSIXMPEEYPPPPHPWFHDYEDMLEDSSHTEFVKRSEGPDIFFSGYNCGLAMPESSESYPQKFRKEDNLVGLAQAI
TNSILSTGRLDVQKKLFTSIQLVGGVALTKGLVGAVEERVLHAIPANEAVDTVEVLQQRTDPLIVSWKGGAILGILDYFS
RDQWIHREDWVHGGIKTGSGRKYRDSHLLQTQAFWYINS*M*LVIISYTRLQHMILWELRKVVFLFI*ELPGFFLFRSI*
MLSTLGKRDMLISKFDFSTCYFKMSI
Longest Translation Frame: -1
Longest ORF: GLXYPSIXMPEEYPPPPHPWFHDYEDMLEDSSHTEFVKRSEGPDIFFSGYNCGLAMPESSESYPQKFRKEDNLVGLAQAI
TNSILSTGRLDVQKKLFTSIQLVGGVALTKGLVGAVEERVLHAIPANEAVDTVEVLQQRTDPLIVSWKGGAILGILDYFS
RDQWIHREDWVHGGIKTGSGRKYRDSHLLQTQAFWYINS
Max ORF Length: 199

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
GO:0005515 protein binding GO:0005200 structural constituent of cytoskeleton GO:0005524 ATP binding GO:0007010 cytoskeleton organization and biogenesis GO:0006897 endocytosis GO:0005884 actin filament GO:0016020 membrane GO:0005737 cytoplasm GO:0005869 dynactin complex

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
UP|Q9LSW2_ARATH (Q9LSW2) Actin-like protein (AT5g43500/MWF20_22), complete TC282824 2.8e-40

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Pfam

Description Hit Id e-value
Actin PF00022 1.70e-24

SMART

Description Hit Id e-value
galpha_1 SM00275 4.50e-22