MNC5630850

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
MN5194697 GQ0048.TB_F03 GQ0048_F03 GQ0012.B3.r_G21 GQ03010_P17 GQ04012_L02

BLAST

Blastx Description Blastx Hit Id Blastx e-value
Low density lipoprotein B-like protein UniRef100_Q9FFF3 2.09414e-21

Unigene

Unigene Id: 52027
Unigene Sequence: TTCCTGATAAATTCAGCAGAACAAATGGCAGGTCCAAAACATGAGATGTTGTTGGTATTGTACTCCAAGATGTCCTTCCC
GCTTATAACCCTACAAGAATAACAGTACTGCAGCAAAGAAAAGCCACAGTTATTTCTTCAGCTTGTGACAACAAATGTTC
TCCTTGTACACTCATCCCTAATATGGGTCTAATAAGTCCTAGAAGAAAAGATAGAATTCACTATCTTAATCATGTGCATT
GATTCCAAGTCTGCACATGAGGAAGCCCTTCACTTTCTGTTGAGCATAGAAATTTAGCAAATGATGTTGCTCAGCTTCTA
ATTTTCTGGTCTGCCTCCACCCACAGTGAGTGATGACAACAGACCAGCAGCTTGTACAGGTAACATATCACCAAACGTGG
ACATTGCAGCAGCTGATTTATCCTTTAGTCTACCAACTTGACCATCGCTTAGCATCGAACCAAGCTTGAATGTTCCCTCT
CCAAACTTGATTCCCACCTGGCTCATAAGTGACTTCAATAAAGGTGTTGCAACCCCAAAACTTGATGTGTCTTCAAAATC
AAACTTAGATGAGAGGTTACCATTGGAATAGGCTTTCCACGAGTTCCTTGCAGTTGAGTCATCTGACAATGTCTGATGCA
TAGTTGATGAAGATGCTCCATTTGCTGACAATATTGGTGCACTGATTGGAAGGTAAGTAAACCGAGGAACTGAAGCATGC
ATCTTTAGAGTATTTGTATCGGTGTTTGTGGGTAGCTTTTGTACGGTATCAGTGTACATGCGGTTGAGTTGTACCAAGAA
GCCAAAAAGAACAGCACTCCG
Full Translation: RSAVLFGFLVQLNRMYTDTVQKLPTNTDTNTLKMHASVPRFTYLPISAPILSANGASSSTMHQTLSDDSTARNSWKAYSN
GNLSSKFDFEDTSSFGVATPLLKSLMSQVGIKFGEGTFKLGSMLSDGQVGRLKDKSAAAMSTFGDMLPVQAAGLLSSLTV
GGGRPEN*KLSNIIC*ISMLNRK*RASSCADLESMHMIKIVNSIFSSRTY*THIRDECTRRTFVVTS*RNNCGFSLLQYC
YSCRVISGKDILEYNTNNISCFGPAICSAEFIR
Longest Translation Frame: -1
Longest ORF: RSAVLFGFLVQLNRMYTDTVQKLPTNTDTNTLKMHASVPRFTYLPISAPILSANGASSSTMHQTLSDDSTARNSWKAYSN
GNLSSKFDFEDTSSFGVATPLLKSLMSQVGIKFGEGTFKLGSMLSDGQVGRLKDKSAAAMSTFGDMLPVQAAGLLSSLTV
GGGRPEN
Max ORF Length: 167

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
N/A N/A N/A

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
UP|Q94F38_ARATH (Q94F38) At1g48490/T1N15_9, complete TC280793 0.002918

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Pfam

Description Hit Id e-value
Tubulin binding cofactor C PF07986 4.20e-24

SMART

Description Hit Id e-value
litaf SM00714 1.10e-19