MNC5625133

EST

ForestTreeDB Contig(dir8): MN ESTs: GQ Reads: GQ Clones: GCAT 2.0 Clusters: GCAT 3.0 Clusters: GCAT 3.1 Clusters:
MN5161077 GQ0023.TB_C22 GQ0023_C22 GQ0023.B3.r_C22 GQ03402_A20 GQ03402_A20

BLAST

Blastx Description Blastx Hit Id Blastx e-value
Photosystem I reaction center subunit II, chloroplast precursor UniRef100_P12353 2.47635e-24

Unigene

Unigene Id: 46310
Unigene Sequence: GCACGAGGCTCTTGAAGCTGGCGAGGAAGGAGCAGTGCCTGGCTCTGGGGACGAGGCTTCGCTCCAAATACAAGATAAAA
TACCAGTTCTACCGCGTTTTTCCAAACGGAGAAGTTCAGTACCTGCACCCTAAGGACGGCGTCTACCCGGAGAAGGTGAA
CCCCGGTCGCAAAGGCGTCGGCGTAAACTTGCGCTCCATCGGCAAGAATGTGAACCCCATTCAGGTTAAGTTCACTGGCA
AACAAACCTACGACGTCTAGAACACCGCCGCCACTATTCCCCTGTATTTCATAGTCTTTCTGTTTTCCACCTCTGCTTTC
TTTTCTTGTCAAACTACCAAAAAATTATGAATGCTTCAAATGCAATTACTGG
Full Translation: Q*LHLKHS*FFGSLTRKESRGGKQKDYEIQGNSGGGVLDVVGLFASELNLNGVHILADGAQVYADAFATGVHLLRVDAVL
RVQVLNFSVWKNAVELVFYLVFGAKPRPQSQALLLPRQLQEPRA
Longest Translation Frame: -2
Longest ORF: FFGSLTRKESRGGKQKDYEIQGNSGGGVLDVVGLFASELNLNGVHILADGAQVYADAFATGVHLLRVDAVLRVQVLNFSV
WKNAVELVFYLVFGAKPRPQSQALLLPRQLQEPRA
Max ORF Length: 115

Gene Ontology

Molecular Function by blast Biological Process by blast Cell Component by blast
GO:0005515 protein binding GO:0015979 photosynthesis GO:0009535 thylakoid membrane (sensu Viridiplantae) GO:0009538 photosystem I reaction center GO:0009507 chloroplast GO:0030094 photosystem I (sensu CyanoBacteria)

Arabidopsis Gene Index v13.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Pine Gene Index v6.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Spruce Gene Index v2.0

Description Blastn Hit Id Blastn e-value
N/A N/A N/A

Pfam

Description Hit Id e-value
PsaD PF02531 5.60e-51

SMART

Description Hit Id e-value
MyTH4_1 SM00139 1.60e-12